Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vcbs repeat-containing protein | C1H87_RS21735 | Not Available | Positive | 5255928 - 5259212 | 121724.0 |
| multiheme c-type cytochrome | C1H87_RS21740 | Not Available | Positive | 5259221 - 5260456 | 46494.1 |
| beta-glucosidase | C1H87_RS21745 | Not Available | Positive | 5261203 - 5263347 | 79776.6 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | C1H87_RS21750 | Not Available | Positive | 5263389 - 5265635 | 82074.4 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | C1H87_RS21755 | Not Available | Negative | 5265833 - 5268229 | 89992.5 |
| grpb family protein | C1H87_RS21760 | Not Available | Negative | 5268559 - 5269155 | 23204.6 |
| hypothetical protein | C1H87_RS21765 | Not Available | Negative | 5269172 - 5269660 | 18962.7 |
| hypothetical protein | C1H87_RS21770 | Not Available | Negative | 5269699 - 5270136 | 16795.6 |
| hypothetical protein | C1H87_RS21775 | Not Available | Negative | 5270282 - 5270839 | 21181.2 |
| duf5694 domain-containing protein | C1H87_RS21780 | Not Available | Negative | 5270974 - 5271834 | 33675.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
