Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6389 family protein | C1H87_RS21685 | Not Available | Negative | 5240188 - 5240634 | 16394.5 |
| alpha/beta fold hydrolase | C1H87_RS21690 | Not Available | Negative | 5240845 - 5241702 | 32582.3 |
| tetr/acrr family transcriptional regulator | C1H87_RS21695 | Not Available | Positive | 5241759 - 5242388 | 25564.0 |
| hypothetical protein | C1H87_RS21700 | Not Available | Negative | 5242465 - 5243328 | 33715.4 |
| two-component regulator propeller domain-containing protein | C1H87_RS21705 | Not Available | Positive | 5243868 - 5248013 | 157134.0 |
| glycoside hydrolase family 5 protein | C1H87_RS21710 | Not Available | Positive | 5248794 - 5249924 | 43900.5 |
| sigma-70 family rna polymerase sigma factor | C1H87_RS21715 | Not Available | Positive | 5249933 - 5250448 | 19930.6 |
| hypothetical protein | C1H87_RS21720 | Not Available | Positive | 5250573 - 5250788 | 8442.35 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS21725 | Not Available | Positive | 5250979 - 5254275 | 119508.0 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS21730 | Not Available | Positive | 5254286 - 5255845 | 56884.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
