Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | C1H87_RS21425 | Not Available | Negative | 5182842 - 5184254 | 53458.9 |
| rna polymerase sigma factor | C1H87_RS21430 | Not Available | Positive | 5184445 - 5184999 | 21602.0 |
| duf6768 family protein | C1H87_RS21435 | Not Available | Positive | 5184989 - 5185375 | 15255.0 |
| ornithine--oxo-acid transaminase | C1H87_RS21440 | Not Available | Positive | 5185517 - 5186761 | 45500.4 |
| ccc motif membrane protein | C1H87_RS21445 | Not Available | Negative | 5186853 - 5187185 | 12369.5 |
| duf2752 domain-containing protein | C1H87_RS21450 | Not Available | Negative | 5187199 - 5187480 | 10817.9 |
| t9ss type a sorting domain-containing protein | C1H87_RS21455 | Not Available | Negative | 5187761 - 5189521 | 65007.8 |
| hypothetical protein | C1H87_RS21460 | Not Available | Positive | 5189694 - 5189885 | 7152.68 |
| dna mismatch repair protein muts | C1H87_RS21465 | Not Available | Positive | 5189888 - 5190451 | 21314.8 |
| hypothetical protein | C1H87_RS21470 | Not Available | Negative | 5190464 - 5191426 | 35506.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
