Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1800 family protein | C1H87_RS21375 | Not Available | Negative | 5172356 - 5174161 | 68363.6 |
| gnat family n-acetyltransferase | C1H87_RS21380 | Not Available | Positive | 5174341 - 5174832 | 18590.8 |
| duf4268 domain-containing protein | C1H87_RS21385 | Not Available | Negative | 5175101 - 5175529 | 17249.6 |
| zip family metal transporter | C1H87_RS21390 | Not Available | Negative | 5175584 - 5176258 | 25093.6 |
| class i sam-dependent methyltransferase | C1H87_RS21395 | Not Available | Negative | 5176304 - 5177035 | 28631.9 |
| class i sam-dependent rna methyltransferase | C1H87_RS21400 | Not Available | Positive | 5177283 - 5178440 | 44023.9 |
| gyri-like domain-containing protein | C1H87_RS21405 | Not Available | Negative | 5178461 - 5179876 | 55388.7 |
| thua domain-containing protein | C1H87_RS21410 | Not Available | Positive | 5180360 - 5181406 | 39450.9 |
| duf6048 family protein | C1H87_RS21415 | Not Available | Negative | 5181436 - 5182122 | 25898.7 |
| duf6452 family protein | C1H87_RS21420 | Not Available | Negative | 5182136 - 5182738 | 22422.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
