Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | C1H87_RS21325 | Not Available | Negative | 5162798 - 5164237 | 53256.0 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | C1H87_RS21330 | Not Available | Negative | 5164340 - 5164828 | 18066.6 |
| prsw family intramembrane metalloprotease | C1H87_RS21335 | Not Available | Negative | 5165002 - 5165676 | 25424.7 |
| nudix hydrolase | C1H87_RS21340 | Not Available | Negative | 5165704 - 5166258 | 20887.8 |
| aminotransferase class v-fold plp-dependent enzyme | C1H87_RS21345 | Not Available | Negative | 5166270 - 5167427 | 43491.0 |
| m42 family metallopeptidase | C1H87_RS21350 | Not Available | Negative | 5167651 - 5168739 | 40601.7 |
| duf4294 domain-containing protein | C1H87_RS21355 | Not Available | Positive | 5168874 - 5169521 | 25562.9 |
| paqr family membrane homeostasis protein trha | C1H87_RS21360 | Not Available | Positive | 5169541 - 5170167 | 23518.3 |
| t9ss type a sorting domain-containing protein | C1H87_RS21365 | Not Available | Negative | 5170183 - 5170938 | 28885.1 |
| duf1501 domain-containing protein | C1H87_RS21370 | Not Available | Negative | 5170935 - 5172350 | 51682.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
