Flavivirga eckloniae str. ECD14

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavivirga

Description

Flavivirga eckloniae strain ECD14 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This organism thrives optimally at a temperature of 29°C, placing it within the mesophilic temperature range, which is conducive to its growth in moderate environmental conditions. Flavivirga eckloniae is distinguished by its genomic structure, possessing a single replicon, which is indicative of its genetic organization. Additionally, this strain is non-spore-forming, suggesting that it relies on other mechanisms to survive adverse conditions instead of forming spores, a trait common in some bacterial species. The accession number for Flavivirga eckloniae str. ECD14 is NZ_CP025791.1, which can be used to locate its genomic information in biological databases. From an ecological perspective, the characteristics of Flavivirga eckloniae str. ECD14 suggest it may play a role in various environments where aerobic conditions prevail, particularly those with moderate temperatures. Its non-motile nature may indicate a lifestyle that is influenced by its immediate surroundings, potentially leading to interactions with other microorganisms or substrates in its habitat. These traits collectively highlight the ecological niche that Flavivirga eckloniae occupies and its potential contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavivirga
SpeciesFlavivirga eckloniae
StrainECD14

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ecklonia
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavivirga eckloniae strain ECD14 chromosome, complete genome.

Gene Summary

Adenine Count

1875697 bp

Thymine Count

1867130 bp

Guanine Count

959621 bp

Cytosine Count

962910 bp

Genome Length

5665358 bp

Protein-coding Genes

4573 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyl-coa carboxylase biotin carboxylase subunitC1H87_RS21325Not AvailableNegative5162798 - 516423753256.0
acetyl-coa carboxylase biotin carboxyl carrier protein subunitC1H87_RS21330Not AvailableNegative5164340 - 516482818066.6
prsw family intramembrane metalloproteaseC1H87_RS21335Not AvailableNegative5165002 - 516567625424.7
nudix hydrolaseC1H87_RS21340Not AvailableNegative5165704 - 516625820887.8
aminotransferase class v-fold plp-dependent enzymeC1H87_RS21345Not AvailableNegative5166270 - 516742743491.0
m42 family metallopeptidaseC1H87_RS21350Not AvailableNegative5167651 - 516873940601.7
duf4294 domain-containing proteinC1H87_RS21355Not AvailablePositive5168874 - 516952125562.9
paqr family membrane homeostasis protein trhaC1H87_RS21360Not AvailablePositive5169541 - 517016723518.3
t9ss type a sorting domain-containing proteinC1H87_RS21365Not AvailableNegative5170183 - 517093828885.1
duf1501 domain-containing proteinC1H87_RS21370Not AvailableNegative5170935 - 517235051682.3

Displaying genes 4251 – 4260 of 4631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.