Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C1H87_RS20970 | Not Available | Negative | 5090100 - 5090924 | 32203.4 |
| abc transporter atp-binding protein | C1H87_RS20975 | Not Available | Negative | 5090944 - 5091840 | 33591.8 |
| hypothetical protein | C1H87_RS20980 | Not Available | Positive | 5091965 - 5093041 | 42779.0 |
| is1096 element passenger tnpr family protein | C1H87_RS20985 | Not Available | Negative | 5093491 - 5094003 | 19858.6 |
| cox15/ctaa family protein | C1H87_RS20990 | Not Available | Negative | 5094041 - 5095057 | 39013.0 |
| gnat family n-acetyltransferase | C1H87_RS20995 | Not Available | Negative | 5095097 - 5095549 | 17562.1 |
| cca trna nucleotidyltransferase | C1H87_RS21000 | Not Available | Negative | 5095533 - 5096969 | 54959.6 |
| l-threonylcarbamoyladenylate synthase | C1H87_RS21005 | Not Available | Negative | 5097100 - 5097660 | 20508.8 |
| class i sam-dependent methyltransferase | C1H87_RS21010 | Not Available | Negative | 5097673 - 5098332 | 25068.5 |
| fkbm family methyltransferase | C1H87_RS21015 | Not Available | Positive | 5098453 - 5099301 | 31776.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
