Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | C1H87_RS20920 | Not Available | Negative | 5068073 - 5069308 | 46357.7 |
| adp-forming succinate--coa ligase subunit beta | C1H87_RS20925 | Not Available | Positive | 5069511 - 5070701 | 42628.1 |
| maue/doxx family redox-associated membrane protein | C1H87_RS20930 | Not Available | Positive | 5070968 - 5072536 | 59829.1 |
| duf6520 family protein | C1H87_RS20935 | Not Available | Positive | 5073363 - 5073629 | 9768.79 |
| duf1456 family protein | C1H87_RS20940 | Not Available | Negative | 5073758 - 5074021 | 10173.6 |
| hypothetical protein | C1H87_RS20945 | Not Available | Positive | 5074357 - 5074764 | 15765.2 |
| excinuclease abc subunit uvrb | C1H87_RS20950 | Not Available | Negative | 5074846 - 5076849 | 76684.4 |
| t9ss type b sorting domain-containing protein | C1H87_RS20955 | Not Available | Negative | 5076877 - 5081943 | 182269.0 |
| t9ss type b sorting domain-containing protein | C1H87_RS20960 | Not Available | Negative | 5082204 - 5087147 | 181097.0 |
| t9ss type b sorting domain-containing protein | C1H87_RS20965 | Not Available | Negative | 5087290 - 5090073 | 102982.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
