Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01212 family radical sam protein | C1H87_RS20455 | Not Available | Positive | 4964395 - 4965330 | 35461.6 |
| m12 family metallo-peptidase | C1H87_RS20465 | Not Available | Positive | 4966156 - 4968186 | 73528.4 |
| discoidin domain-containing protein | C1H87_RS20470 | Not Available | Positive | 4968344 - 4971628 | 121370.0 |
| merr family transcriptional regulator | C1H87_RS20475 | Not Available | Positive | 4972301 - 4973071 | 30194.6 |
| rna polymerase sigma factor | C1H87_RS20480 | Not Available | Positive | 4973212 - 4973715 | 19876.0 |
| hypothetical protein | C1H87_RS20485 | Not Available | Positive | 4973900 - 4974472 | 21990.4 |
| fecr family protein | C1H87_RS20490 | Not Available | Positive | 4974670 - 4975644 | 37096.6 |
| tonb-dependent receptor | C1H87_RS20495 | Not Available | Positive | 4975737 - 4978475 | 104105.0 |
| duf4249 family protein | C1H87_RS20500 | Not Available | Positive | 4978486 - 4979349 | 32288.1 |
| hypothetical protein | C1H87_RS20505 | Not Available | Positive | 4979374 - 4979574 | 7783.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
