Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | C1H87_RS23785 | Not Available | Negative | 4937487 - 4937630 | 5264.42 |
| blai/meci/copy family transcriptional regulator | C1H87_RS20355 | Not Available | Positive | 4937945 - 4938316 | 14305.3 |
| m56 family metallopeptidase | C1H87_RS20360 | Not Available | Positive | 4938313 - 4939350 | 40893.3 |
| tonb-dependent receptor domain-containing protein | C1H87_RS20365 | Not Available | Negative | 4939858 - 4942293 | 90800.9 |
| sensor histidine kinase | C1H87_RS20370 | Not Available | Positive | 4942546 - 4943700 | 44695.6 |
| lytr/algr family response regulator transcription factor | C1H87_RS20375 | Not Available | Positive | 4943711 - 4944445 | 28337.8 |
| bspa family leucine-rich repeat surface protein | C1H87_RS20380 | Not Available | Negative | 4944665 - 4947469 | 104886.0 |
| bspa family leucine-rich repeat surface protein | C1H87_RS20385 | Not Available | Negative | 4947627 - 4949558 | 71472.0 |
| hypothetical protein | C1H87_RS20390 | Not Available | Negative | 4949621 - 4949887 | 10090.6 |
| hypothetical protein | C1H87_RS20395 | Not Available | Negative | 4950042 - 4951295 | 47419.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
