Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | C1H87_RS20095 | Not Available | Positive | 4895655 - 4896404 | 28683.6 |
| abc transporter atp-binding protein | C1H87_RS20100 | Not Available | Positive | 4896397 - 4898166 | 67100.3 |
| glycoside hydrolase family 43 protein | C1H87_RS20105 | Not Available | Positive | 4898437 - 4900074 | 61809.5 |
| duf3667 domain-containing protein | C1H87_RS20110 | Not Available | Negative | 4900103 - 4900885 | 29791.2 |
| diadenylate cyclase | C1H87_RS20115 | Not Available | Negative | 4900885 - 4901670 | 29459.5 |
| hypothetical protein | C1H87_RS20120 | Not Available | Negative | 4901706 - 4902377 | 25583.3 |
| dihydropteroate synthase | C1H87_RS20125 | Not Available | Negative | 4902383 - 4903210 | 30728.5 |
| duf1599 domain-containing protein | C1H87_RS20130 | Not Available | Positive | 4903316 - 4903855 | 20597.7 |
| bt_3928 family protein | C1H87_RS20135 | Not Available | Positive | 4903939 - 4905249 | 49792.5 |
| abc transporter permease | C1H87_RS20140 | Not Available | Positive | 4905256 - 4906332 | 40407.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
