Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase i fole | C1H87_RS20045 | Not Available | Negative | 4885858 - 4886535 | 25446.4 |
| ompp1/fadl family transporter | C1H87_RS20050 | Not Available | Negative | 4886921 - 4888462 | 57347.6 |
| hypothetical protein | C1H87_RS20055 | Not Available | Negative | 4888493 - 4889656 | 43712.9 |
| proline--trna ligase | C1H87_RS20060 | Not Available | Positive | 4889756 - 4891234 | 55956.6 |
| Trna-glu | Not Available | Not Available | Positive | 4891395 - 4891466 | Not Available |
| 30s ribosomal protein s20 | C1H87_RS20070 | Not Available | Positive | 4891493 - 4891744 | 9360.58 |
| hypothetical protein | C1H87_RS20075 | Not Available | Positive | 4892049 - 4892411 | 14168.0 |
| transcription termination factor rho | C1H87_RS20080 | Not Available | Negative | 4892519 - 4894198 | 63671.7 |
| duf4293 domain-containing protein | C1H87_RS20085 | Not Available | Positive | 4894394 - 4894804 | 15152.2 |
| metallophosphoesterase family protein | C1H87_RS20090 | Not Available | Negative | 4894985 - 4895479 | 18887.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
