Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1H87_RS19895 | Not Available | Negative | 4851921 - 4852517 | 21147.0 |
| sir2 family nad-dependent protein deacylase | C1H87_RS19900 | Not Available | Negative | 4852647 - 4853327 | 25125.1 |
| trmh family rna methyltransferase | C1H87_RS19905 | Not Available | Positive | 4853409 - 4854065 | 25453.4 |
| srpbcc family protein | C1H87_RS19910 | Not Available | Positive | 4854107 - 4854637 | 20203.7 |
| voc family protein | C1H87_RS19915 | Not Available | Positive | 4854649 - 4855026 | 13834.4 |
| carboxypeptidase-like regulatory domain-containing protein | C1H87_RS19920 | Not Available | Negative | 4855703 - 4856479 | 29120.3 |
| hypothetical protein | C1H87_RS19925 | Not Available | Positive | 4856825 - 4857310 | 18659.3 |
| duf5995 family protein | C1H87_RS19930 | Not Available | Positive | 4857307 - 4858083 | 29703.9 |
| alpha-l-fucosidase | C1H87_RS19935 | Not Available | Positive | 4858469 - 4860355 | 72894.6 |
| hsp20/alpha crystallin family protein | C1H87_RS19940 | Not Available | Positive | 4860680 - 4861117 | 16639.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
