Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | C1H87_RS19845 | Not Available | Positive | 4844717 - 4845226 | 20014.2 |
| hypothetical protein | C1H87_RS19850 | Not Available | Positive | 4845213 - 4845701 | 18652.2 |
| duf4252 domain-containing protein | C1H87_RS19855 | Not Available | Positive | 4845716 - 4846309 | 22150.2 |
| duf4252 domain-containing protein | C1H87_RS19860 | Not Available | Positive | 4846552 - 4847097 | 20411.2 |
| hypothetical protein | C1H87_RS19865 | Not Available | Negative | 4847344 - 4847553 | 7564.45 |
| adenylosuccinate lyase | C1H87_RS19870 | Not Available | Negative | 4847558 - 4848901 | 50480.2 |
| adenylosuccinate lyase | C1H87_RS19875 | Not Available | Negative | 4848975 - 4849550 | 22459.3 |
| heme-binding domain-containing protein | C1H87_RS19880 | Not Available | Positive | 4849593 - 4850066 | 18335.8 |
| glycosyltransferase | C1H87_RS19885 | Not Available | Positive | 4850230 - 4851471 | 47580.3 |
| cupin domain-containing protein | C1H87_RS19890 | Not Available | Positive | 4851475 - 4851891 | 15394.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
