Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | C1H87_RS19695 | Not Available | Positive | 4812912 - 4813577 | 25414.4 |
| lytic transglycosylase domain-containing protein | C1H87_RS19700 | Not Available | Positive | 4813613 - 4814539 | 35405.6 |
| hypothetical protein | C1H87_RS19705 | Not Available | Positive | 4814603 - 4815109 | 20001.9 |
| tetratricopeptide repeat protein | C1H87_RS19710 | Not Available | Negative | 4815125 - 4815700 | 22002.4 |
| 50s ribosomal protein l34 | C1H87_RS19715 | Not Available | Positive | 4815990 - 4816151 | 6321.83 |
| carbamoyl-phosphate synthase large subunit | C1H87_RS19720 | Not Available | Positive | 4816269 - 4819124 | 106148.0 |
| t9ss type a sorting domain-containing protein | C1H87_RS19725 | Not Available | Positive | 4819323 - 4821515 | 80907.1 |
| ycei family protein | C1H87_RS19730 | Not Available | Negative | 4821734 - 4822282 | 20281.4 |
| hypothetical protein | C1H87_RS19735 | Not Available | Negative | 4822450 - 4822812 | 13258.6 |
| duf5777 family beta-barrel protein | C1H87_RS19740 | Not Available | Negative | 4822851 - 4823699 | 31549.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
