Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysoplasmalogenase family protein | C1H87_RS19645 | Not Available | Positive | 4802268 - 4802939 | 26055.8 |
| tolb family protein | C1H87_RS19650 | Not Available | Positive | 4803101 - 4804015 | 34096.6 |
| lysoplasmalogenase | C1H87_RS19655 | Not Available | Positive | 4804058 - 4804765 | 27930.8 |
| lysoplasmalogenase family protein | C1H87_RS19660 | Not Available | Positive | 4804969 - 4805673 | 27616.1 |
| abc transporter substrate-binding protein | C1H87_RS19665 | Not Available | Negative | 4805660 - 4807261 | 61464.4 |
| hypothetical protein | C1H87_RS19670 | Not Available | Negative | 4807311 - 4809074 | 69456.7 |
| atp-binding cassette domain-containing protein | C1H87_RS19675 | Not Available | Negative | 4809087 - 4810250 | 44961.1 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | C1H87_RS19680 | Not Available | Positive | 4810399 - 4811739 | 50657.1 |
| hypothetical protein | C1H87_RS19685 | Not Available | Positive | 4811850 - 4812350 | 18684.0 |
| n-acetyltransferase | C1H87_RS19690 | Not Available | Negative | 4812418 - 4812714 | 11525.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
