Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40/yvtn/bnr-like repeat-containing protein | C1H87_RS19590 | Not Available | Positive | 4791540 - 4792610 | 39285.7 |
| sensor of ecf-type sigma factor | C1H87_RS19595 | Not Available | Negative | 4793115 - 4793561 | 17646.9 |
| hypothetical protein | C1H87_RS19600 | Not Available | Negative | 4793573 - 4794070 | 18838.2 |
| rna polymerase sigma factor | C1H87_RS19605 | Not Available | Negative | 4794107 - 4794649 | 21170.4 |
| abc transporter atp-binding protein | C1H87_RS19610 | Not Available | Negative | 4794941 - 4796809 | 69486.5 |
| phospho-sugar mutase | C1H87_RS19615 | Not Available | Negative | 4796875 - 4798605 | 63706.9 |
| glycosyltransferase family 2 protein | C1H87_RS19620 | Not Available | Negative | 4798731 - 4799681 | 36169.0 |
| duf4199 domain-containing protein | C1H87_RS19625 | Not Available | Negative | 4799718 - 4800248 | 19221.6 |
| type b 50s ribosomal protein l31 | C1H87_RS19630 | Not Available | Positive | 4800408 - 4800659 | 9595.48 |
| glmu family protein | C1H87_RS19635 | Not Available | Positive | 4800799 - 4801974 | 43884.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
