Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructosamine kinase family protein | C1H87_RS19540 | Not Available | Negative | 4782330 - 4783190 | 32325.5 |
| dihydrofolate reductase family protein | C1H87_RS19545 | Not Available | Negative | 4783209 - 4783754 | 20707.1 |
| rsmb/nop family class i sam-dependent rna methyltransferase | C1H87_RS19550 | Not Available | Negative | 4783948 - 4785162 | 46340.2 |
| rna polymerase sigma factor | C1H87_RS19555 | Not Available | Positive | 4785362 - 4785940 | 22151.6 |
| hypothetical protein | C1H87_RS19560 | Not Available | Positive | 4785981 - 4786295 | 11898.2 |
| spy/cpxp family protein refolding chaperone | C1H87_RS19565 | Not Available | Positive | 4786306 - 4786824 | 20232.2 |
| yhyh protein | C1H87_RS19570 | Not Available | Positive | 4787052 - 4787825 | 28343.5 |
| toxin-antitoxin system ywqk family antitoxin | C1H87_RS19575 | Not Available | Positive | 4787826 - 4788395 | 22053.6 |
| sco family protein | C1H87_RS19580 | Not Available | Positive | 4788392 - 4789024 | 24324.1 |
| hypothetical protein | C1H87_RS19585 | Not Available | Positive | 4789223 - 4791124 | 73472.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
