Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydei/ompd-associated family protein | C1H87_RS19395 | Not Available | Negative | 4740914 - 4741486 | 22294.7 |
| m1 family metallopeptidase | C1H87_RS19400 | Not Available | Negative | 4741492 - 4743135 | 63756.3 |
| m28 family peptidase | C1H87_RS19405 | Not Available | Negative | 4743843 - 4745177 | 49952.3 |
| duf6265 family protein | C1H87_RS19410 | Not Available | Negative | 4745318 - 4745797 | 18499.1 |
| acyl-coa dehydrogenase family protein | C1H87_RS19415 | Not Available | Negative | 4745961 - 4747772 | 67375.2 |
| acetyl-coa c-acyltransferase | C1H87_RS19420 | Not Available | Negative | 4747909 - 4749099 | 42685.4 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | C1H87_RS19425 | Not Available | Negative | 4749234 - 4751642 | 88513.2 |
| marr family winged helix-turn-helix transcriptional regulator | C1H87_RS19430 | Not Available | Negative | 4751652 - 4752095 | 16695.1 |
| amp-dependent synthetase/ligase | C1H87_RS19435 | Not Available | Negative | 4752212 - 4753981 | 67156.9 |
| formate c-acetyltransferase | C1H87_RS19440 | Not Available | Positive | 4754412 - 4756637 | 82781.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
