Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | C1H87_RS19245 | Not Available | Negative | 4707258 - 4707887 | 23149.8 |
| oxygen-independent coproporphyrinogen iii oxidase | C1H87_RS19250 | Not Available | Positive | 4708012 - 4709376 | 52472.8 |
| universal stress protein | C1H87_RS19255 | Not Available | Positive | 4709458 - 4710288 | 30958.2 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | C1H87_RS19260 | Not Available | Negative | 4710420 - 4711019 | 22942.6 |
| endonuclease domain-containing protein | C1H87_RS19270 | Not Available | Negative | 4711672 - 4712031 | 14462.5 |
| phytanoyl-coa dioxygenase | C1H87_RS19275 | Not Available | Negative | 4712529 - 4713521 | 37155.6 |
| type 1 glutamine amidotransferase domain-containing protein | C1H87_RS19280 | Not Available | Negative | 4713527 - 4714297 | 28515.2 |
| cyclase family protein | C1H87_RS19285 | Not Available | Negative | 4714412 - 4715251 | 31266.3 |
| hypothetical protein | C1H87_RS19290 | Not Available | Negative | 4715264 - 4715659 | 14467.3 |
| nuclear transport factor 2 family protein | C1H87_RS19295 | Not Available | Negative | 4715763 - 4716212 | 17627.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
