Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | C1H87_RS19195 | Not Available | Negative | 4699929 - 4700270 | 12801.6 |
| duf4870 domain-containing protein | C1H87_RS19200 | Not Available | Negative | 4700374 - 4700820 | 16727.6 |
| duf4442 domain-containing protein | C1H87_RS19205 | Not Available | Positive | 4700967 - 4701422 | 16807.7 |
| tigr00266 family protein | C1H87_RS19210 | Not Available | Positive | 4701605 - 4702405 | 28263.1 |
| hypothetical protein | C1H87_RS19215 | Not Available | Positive | 4702536 - 4702733 | 7695.62 |
| nadase-type glycan-binding domain-containing protein | C1H87_RS19220 | Not Available | Positive | 4702882 - 4703592 | 27215.7 |
| signal peptidase ii | C1H87_RS19225 | Not Available | Positive | 4703931 - 4704446 | 19103.2 |
| hypothetical protein | C1H87_RS19230 | Not Available | Positive | 4704852 - 4705664 | 30700.5 |
| had family hydrolase | C1H87_RS19235 | Not Available | Positive | 4705826 - 4706509 | 26157.2 |
| ydei/ompd-associated family protein | C1H87_RS19240 | Not Available | Negative | 4706524 - 4707123 | 23415.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
