Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | C1H87_RS18845 | Not Available | Positive | 4585638 - 4588817 | 118437.0 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS18850 | Not Available | Positive | 4588829 - 4590613 | 68332.0 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS18855 | Not Available | Positive | 4590639 - 4593620 | 110991.0 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS18860 | Not Available | Positive | 4593637 - 4595334 | 64081.9 |
| bt_3987 domain-containing protein | C1H87_RS18865 | Not Available | Positive | 4595370 - 4596302 | 35319.0 |
| two-component regulator propeller domain-containing protein | C1H87_RS18870 | Not Available | Negative | 4597425 - 4601564 | 157447.0 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | C1H87_RS18875 | Not Available | Positive | 4602160 - 4604610 | 90781.2 |
| alpha-l-fucosidase | C1H87_RS18880 | Not Available | Positive | 4604928 - 4606400 | 55922.8 |
| right-handed parallel beta-helix repeat-containing protein | C1H87_RS18885 | Not Available | Positive | 4606415 - 4608901 | 93886.1 |
| alpha-l-fucosidase | C1H87_RS18890 | Not Available | Positive | 4608941 - 4610407 | 56411.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
