Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | C1H87_RS18795 | Not Available | Positive | 4569316 - 4569663 | 13208.8 |
| winged helix-turn-helix transcriptional regulator | C1H87_RS18800 | Not Available | Negative | 4569684 - 4570109 | 16378.1 |
| sdr family nad(p)-dependent oxidoreductase | C1H87_RS18805 | Not Available | Positive | 4570216 - 4570998 | 28094.5 |
| arac family transcriptional regulator | C1H87_RS18810 | Not Available | Negative | 4571092 - 4571958 | 33421.4 |
| rraa family protein | C1H87_RS18815 | Not Available | Positive | 4572112 - 4572813 | 25888.2 |
| glycoside hydrolase family 97 protein | C1H87_RS18820 | Not Available | Positive | 4573394 - 4575298 | 71165.6 |
| hypothetical protein | C1H87_RS18825 | Not Available | Positive | 4576053 - 4576769 | 25750.9 |
| t9ss type a sorting domain-containing protein | C1H87_RS18830 | Not Available | Positive | 4576951 - 4579923 | 109202.0 |
| fisump domain-containing protein | C1H87_RS18835 | Not Available | Positive | 4581786 - 4583684 | 70224.4 |
| fisump domain-containing protein | C1H87_RS18840 | Not Available | Positive | 4583720 - 4585597 | 69188.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
