Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5004 domain-containing protein | C1H87_RS18745 | Not Available | Positive | 4556116 - 4556565 | 16518.5 |
| duf4961 domain-containing protein | C1H87_RS18750 | Not Available | Positive | 4556597 - 4557463 | 31227.4 |
| duf4961 domain-containing protein | C1H87_RS18755 | Not Available | Positive | 4557515 - 4558498 | 35385.1 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS18760 | Not Available | Positive | 4558512 - 4561643 | 113945.0 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS18765 | Not Available | Positive | 4561661 - 4563163 | 56864.8 |
| rok family protein | C1H87_RS18770 | Not Available | Positive | 4563482 - 4566169 | 101103.0 |
| hypothetical protein | C1H87_RS18775 | Not Available | Positive | 4567023 - 4568045 | 39724.7 |
| hypothetical protein | C1H87_RS18780 | Not Available | Positive | 4568062 - 4568271 | 7782.87 |
| hypothetical protein | C1H87_RS18785 | Not Available | Positive | 4568271 - 4568711 | 16497.9 |
| winged helix-turn-helix transcriptional regulator | C1H87_RS18790 | Not Available | Negative | 4568779 - 4569228 | 17197.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
