Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | C1H87_RS18590 | Not Available | Negative | 4512575 - 4513459 | 34504.0 |
| duf5107 domain-containing protein | C1H87_RS18595 | Not Available | Positive | 4513638 - 4516931 | 126242.0 |
| rna polymerase sigma-70 factor | C1H87_RS18600 | Not Available | Positive | 4516991 - 4517563 | 22510.3 |
| bnr-4 repeat-containing protein | C1H87_RS18605 | Not Available | Positive | 4517862 - 4519199 | 51245.1 |
| rna polymerase sigma factor | C1H87_RS18610 | Not Available | Positive | 4519393 - 4519989 | 23838.7 |
| fecr family protein | C1H87_RS18615 | Not Available | Positive | 4520564 - 4521757 | 45218.0 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS18620 | Not Available | Positive | 4521918 - 4525286 | 124190.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | C1H87_RS18625 | Not Available | Positive | 4525305 - 4526933 | 60976.1 |
| hypothetical protein | C1H87_RS18630 | Not Available | Positive | 4526953 - 4528110 | 42292.9 |
| ipt/tig domain-containing protein | C1H87_RS18635 | Not Available | Positive | 4528166 - 4529620 | 50389.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
