Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | C1H87_RS18540 | Not Available | Negative | 4497546 - 4498163 | 24140.6 |
| fecr family protein | C1H87_RS18545 | Not Available | Positive | 4498269 - 4499417 | 44174.2 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS18550 | Not Available | Positive | 4499688 - 4503230 | 131490.0 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS18555 | Not Available | Positive | 4503242 - 4504672 | 53946.1 |
| cadherin repeat domain-containing protein | C1H87_RS18560 | Not Available | Positive | 4504685 - 4505413 | 25719.6 |
| tlpa family protein disulfide reductase | C1H87_RS18565 | Not Available | Positive | 4505616 - 4507001 | 52751.6 |
| thioredoxin-like domain-containing protein | C1H87_RS18570 | Not Available | Positive | 4507020 - 4508228 | 45574.2 |
| hypothetical protein | C1H87_RS18575 | Not Available | Negative | 4508379 - 4508651 | 9906.09 |
| glycoside hydrolase family 88 protein | C1H87_RS18580 | Not Available | Positive | 4508969 - 4510156 | 45010.3 |
| hypothetical protein | C1H87_RS18585 | Not Available | Positive | 4510281 - 4512548 | 85986.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
