Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 97 protein | C1H87_RS18490 | Not Available | Positive | 4483432 - 4485531 | 80031.1 |
| hypothetical protein | C1H87_RS23775 | Not Available | Negative | 4486392 - 4486484 | 3512.4 |
| sugar porter family mfs transporter | C1H87_RS18495 | Not Available | Negative | 4486523 - 4487917 | 51677.0 |
| gntr family transcriptional regulator | C1H87_RS18500 | Not Available | Positive | 4488318 - 4488941 | 23803.9 |
| tartrate dehydrogenase | C1H87_RS18505 | Not Available | Positive | 4488953 - 4489999 | 38564.5 |
| cyclase family protein | C1H87_RS18510 | Not Available | Positive | 4490006 - 4490644 | 23404.1 |
| four-carbon acid sugar kinase family protein | C1H87_RS18515 | Not Available | Positive | 4490641 - 4492041 | 52122.5 |
| mfs transporter | C1H87_RS18520 | Not Available | Positive | 4492043 - 4493305 | 46818.7 |
| gfo/idh/moca family protein | C1H87_RS18525 | Not Available | Positive | 4493295 - 4494320 | 39622.4 |
| duf5060 domain-containing protein | C1H87_RS23465 | Not Available | Positive | 4494379 - 4497252 | 107605.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
