Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | C1H87_RS01760 | Not Available | Positive | 428730 - 430151 | 51657.0 |
| nuclear transport factor 2 family protein | C1H87_RS01765 | Not Available | Negative | 430770 - 431228 | 17528.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | C1H87_RS01770 | Not Available | Positive | 431349 - 432167 | 30012.5 |
| rlua family pseudouridine synthase | C1H87_RS01775 | Not Available | Positive | 432232 - 432933 | 26721.6 |
| aldehyde dehydrogenase | C1H87_RS01780 | Not Available | Positive | 432960 - 434339 | 51588.7 |
| sensor histidine kinase | C1H87_RS01785 | Not Available | Negative | 434440 - 435240 | 30354.0 |
| hypothetical protein | C1H87_RS01790 | Not Available | Negative | 435216 - 435908 | 27619.7 |
| hypothetical protein | C1H87_RS01795 | Not Available | Negative | 435951 - 436496 | 20149.8 |
| cpbp family intramembrane glutamic endopeptidase | C1H87_RS01800 | Not Available | Negative | 436582 - 437208 | 24322.9 |
| lrp/asnc family transcriptional regulator | C1H87_RS01805 | Not Available | Negative | 437223 - 437681 | 17870.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
