Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 c-terminal domain-containing protein | C1H87_RS18440 | Not Available | Negative | 4458927 - 4461155 | 82678.2 |
| sulfatase | C1H87_RS18445 | Not Available | Negative | 4461188 - 4462762 | 61010.5 |
| t9ss type a sorting domain-containing protein | C1H87_RS18450 | Not Available | Negative | 4463042 - 4463740 | 24587.0 |
| vcbs repeat-containing protein | C1H87_RS18455 | Not Available | Negative | 4463880 - 4467182 | 124261.0 |
| fg-gap-like repeat-containing protein | C1H87_RS18460 | Not Available | Negative | 4467236 - 4471270 | 149254.0 |
| hypothetical protein | C1H87_RS18465 | Not Available | Negative | 4471606 - 4473111 | 54426.7 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS18470 | Not Available | Negative | 4473128 - 4474933 | 66371.2 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS18475 | Not Available | Negative | 4474944 - 4478222 | 119676.0 |
| sulfatase-like hydrolase/transferase | C1H87_RS18480 | Not Available | Positive | 4478611 - 4480125 | 57616.7 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | C1H87_RS18485 | Not Available | Positive | 4480164 - 4483421 | 123209.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
