Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5690 family protein | C1H87_RS18340 | Not Available | Positive | 4431379 - 4432662 | 48499.0 |
| tigr03364 family fad-dependent oxidoreductase | C1H87_RS18345 | Not Available | Positive | 4432652 - 4433812 | 43406.8 |
| phosphonatase-like hydrolase | C1H87_RS18350 | Not Available | Positive | 4433827 - 4434504 | 24715.8 |
| helix-turn-helix domain-containing protein | C1H87_RS18355 | Not Available | Negative | 4434542 - 4435117 | 21360.7 |
| fibronectin type iii domain-containing protein | C1H87_RS18360 | Not Available | Positive | 4435771 - 4437351 | 60536.1 |
| sulfatase family protein | C1H87_RS18365 | Not Available | Negative | 4437473 - 4438996 | 57032.9 |
| family 43 glycosylhydrolase | C1H87_RS18370 | Not Available | Negative | 4438999 - 4440333 | 50100.1 |
| alpha-l-fucosidase | C1H87_RS18375 | Not Available | Negative | 4440345 - 4441751 | 54216.1 |
| fibronectin type iii domain-containing protein | C1H87_RS18380 | Not Available | Negative | 4441888 - 4442595 | 25364.3 |
| right-handed parallel beta-helix repeat-containing protein | C1H87_RS18385 | Not Available | Negative | 4442592 - 4445372 | 100594.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
