Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | C1H87_RS18090 | Not Available | Negative | 4365245 - 4368538 | 120053.0 |
| fecr family protein | C1H87_RS18095 | Not Available | Negative | 4368780 - 4369922 | 43326.9 |
| rna polymerase sigma factor | C1H87_RS18100 | Not Available | Positive | 4370009 - 4370563 | 21896.8 |
| hypothetical protein | C1H87_RS18105 | Not Available | Negative | 4370694 - 4371488 | 29367.1 |
| iclr family transcriptional regulator | C1H87_RS18110 | Not Available | Negative | 4371589 - 4372359 | 28683.7 |
| l-rhamnose/proton symporter rhat | C1H87_RS18115 | Not Available | Positive | 4372473 - 4373540 | 38483.7 |
| abc transporter substrate-binding protein | C1H87_RS18120 | Not Available | Positive | 4373560 - 4374711 | 43186.5 |
| caib/baif coa transferase family protein | C1H87_RS18125 | Not Available | Positive | 4374713 - 4375855 | 42083.9 |
| caib/baif coa transferase family protein | C1H87_RS18130 | Not Available | Positive | 4375908 - 4377053 | 41773.9 |
| abc transporter substrate-binding protein | C1H87_RS18135 | Not Available | Positive | 4377054 - 4378289 | 46635.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
