Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | C1H87_RS17640 | Not Available | Negative | 4249465 - 4249836 | 14001.6 |
| biotin--[acetyl-coa-carboxylase] ligase | C1H87_RS17645 | Not Available | Positive | 4249930 - 4250661 | 27762.6 |
| orotate phosphoribosyltransferase | C1H87_RS17650 | Not Available | Negative | 4250658 - 4251053 | 14419.5 |
| orotate phosphoribosyltransferase | C1H87_RS17655 | Not Available | Negative | 4251133 - 4251777 | 23597.2 |
| nudix hydrolase | C1H87_RS17660 | Not Available | Positive | 4251908 - 4252489 | 22391.2 |
| t9ss type a sorting domain-containing protein | C1H87_RS17665 | Not Available | Positive | 4252718 - 4257334 | 160149.0 |
| tonb-dependent receptor | C1H87_RS17670 | Not Available | Negative | 4257548 - 4259962 | 91380.6 |
| duf4249 domain-containing protein | C1H87_RS17675 | Not Available | Negative | 4259982 - 4261124 | 43772.5 |
| hypothetical protein | C1H87_RS17680 | Not Available | Negative | 4261150 - 4261416 | 10313.4 |
| m14 family metallopeptidase | C1H87_RS17685 | Not Available | Negative | 4261734 - 4263476 | 67805.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
