Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | C1H87_RS17590 | Not Available | Positive | 4235629 - 4236561 | 32636.5 |
| secdf p1 head subdomain-containing protein | C1H87_RS17595 | Not Available | Positive | 4236628 - 4237569 | 35568.6 |
| hypothetical protein | C1H87_RS17600 | Not Available | Positive | 4237731 - 4238345 | 23148.4 |
| protein translocase subunit secdf | C1H87_RS17605 | Not Available | Positive | 4238564 - 4241554 | 109236.0 |
| family 16 glycoside hydrolase | C1H87_RS17610 | Not Available | Positive | 4242487 - 4244772 | 84780.4 |
| acyl-coa-binding protein | C1H87_RS17615 | Not Available | Negative | 4245053 - 4245319 | 10296.2 |
| phosphatidylserine decarboxylase family protein | C1H87_RS17620 | Not Available | Negative | 4245323 - 4245973 | 24646.4 |
| phosphatidate cytidylyltransferase | C1H87_RS17625 | Not Available | Negative | 4245963 - 4246784 | 30966.8 |
| lud domain-containing protein | C1H87_RS17630 | Not Available | Negative | 4246786 - 4247394 | 23208.7 |
| atp-dependent zinc metalloprotease ftsh | C1H87_RS17635 | Not Available | Negative | 4247515 - 4249455 | 71987.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
