Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | C1H87_RS17455 | Not Available | Negative | 4199636 - 4200532 | 34020.2 |
| rna polymerase sigma factor | C1H87_RS17460 | Not Available | Negative | 4200933 - 4201448 | 20208.6 |
| hypothetical protein | C1H87_RS17465 | Not Available | Positive | 4201564 - 4203372 | 69244.6 |
| signal recognition particle protein | C1H87_RS17470 | Not Available | Positive | 4203571 - 4204899 | 48292.1 |
| four helix bundle protein | C1H87_RS17475 | Not Available | Positive | 4204958 - 4205329 | 14262.9 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | C1H87_RS17480 | Not Available | Positive | 4205465 - 4206346 | 31896.9 |
| response regulator | C1H87_RS17485 | Not Available | Positive | 4207012 - 4208871 | 70264.4 |
| glycosyltransferase family 4 protein | C1H87_RS17490 | Not Available | Negative | 4209006 - 4211255 | 85974.8 |
| voc family protein | C1H87_RS17495 | Not Available | Negative | 4211614 - 4212039 | 16185.3 |
| 23s rrna pseudouridine(2604) synthase rluf | C1H87_RS17500 | Not Available | Negative | 4212050 - 4212808 | 28976.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
