Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | C1H87_RS17250 | Not Available | Positive | 4162558 - 4162956 | 14758.0 |
| 50s ribosomal protein l6 | C1H87_RS17255 | Not Available | Positive | 4162975 - 4163517 | 19709.9 |
| 50s ribosomal protein l18 | C1H87_RS17260 | Not Available | Positive | 4163528 - 4163884 | 12805.5 |
| 30s ribosomal protein s5 | C1H87_RS17265 | Not Available | Positive | 4163891 - 4164415 | 18104.1 |
| 50s ribosomal protein l30 | C1H87_RS17270 | Not Available | Positive | 4164428 - 4164610 | 6677.44 |
| 50s ribosomal protein l15 | C1H87_RS17275 | Not Available | Positive | 4164624 - 4165076 | 16075.4 |
| preprotein translocase subunit secy | C1H87_RS17280 | Not Available | Positive | 4165092 - 4166444 | 48810.1 |
| translation initiation factor if-1 | C1H87_RS17285 | Not Available | Positive | 4166456 - 4166671 | 8109.01 |
| type b 50s ribosomal protein l36 | C1H87_RS17290 | Not Available | Positive | 4166743 - 4166859 | 4558.81 |
| 30s ribosomal protein s13 | C1H87_RS17295 | Not Available | Positive | 4166862 - 4167236 | 13967.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
