Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5723 family protein | C1H87_RS17095 | Not Available | Positive | 4130068 - 4131483 | 53211.5 |
| hypothetical protein | C1H87_RS17100 | Not Available | Positive | 4131473 - 4132339 | 32866.4 |
| replication-associated recombination protein a | C1H87_RS17105 | Not Available | Negative | 4132420 - 4133697 | 47589.9 |
| rhomboid family intramembrane serine protease | C1H87_RS17110 | Not Available | Positive | 4133977 - 4134723 | 29454.0 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | C1H87_RS17115 | Not Available | Negative | 4134852 - 4135592 | 26748.6 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS17120 | Not Available | Negative | 4135657 - 4137117 | 54039.1 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS17125 | Not Available | Negative | 4137124 - 4140318 | 116397.0 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS17135 | Not Available | Negative | 4140604 - 4142172 | 57464.1 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS17140 | Not Available | Negative | 4142184 - 4145261 | 113395.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | C1H87_RS17145 | Not Available | Negative | 4145683 - 4147116 | 52693.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
