Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | C1H87_RS16995 | Not Available | Positive | 4108322 - 4109431 | 41515.8 |
| gtpase obge | C1H87_RS17000 | Not Available | Positive | 4109541 - 4110539 | 36626.9 |
| duf4136 domain-containing protein | C1H87_RS17005 | Not Available | Positive | 4110795 - 4111316 | 19287.2 |
| m64 family metallopeptidase | C1H87_RS17010 | Not Available | Negative | 4111318 - 4112733 | 51935.0 |
| hypothetical protein | C1H87_RS17015 | Not Available | Negative | 4112730 - 4113185 | 17285.0 |
| doxx family membrane protein | C1H87_RS17020 | Not Available | Negative | 4113436 - 4113807 | 13438.2 |
| alpha-2-macroglobulin family protein | C1H87_RS17025 | Not Available | Negative | 4113887 - 4120024 | 235552.0 |
| tetratricopeptide repeat protein | C1H87_RS17030 | Not Available | Positive | 4120164 - 4121117 | 36429.0 |
| udp-n-acetylmuramate--l-alanine ligase | C1H87_RS17035 | Not Available | Positive | 4121469 - 4122824 | 50869.2 |
| lipocalin family protein | C1H87_RS17040 | Not Available | Negative | 4122869 - 4123669 | 29377.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
