Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf389 domain-containing protein | C1H87_RS16840 | Not Available | Positive | 4072411 - 4073886 | 55396.4 |
| atp-binding protein | C1H87_RS16845 | Not Available | Positive | 4073926 - 4074828 | 33565.1 |
| polysaccharide lyase family 7 protein | C1H87_RS16850 | Not Available | Negative | 4074971 - 4076305 | 48379.2 |
| abc transporter atp-binding protein | C1H87_RS16855 | Not Available | Negative | 4076521 - 4077288 | 28723.6 |
| mlae family abc transporter permease | C1H87_RS16860 | Not Available | Negative | 4077288 - 4078025 | 26925.8 |
| alkaline phosphatase pafa | C1H87_RS16865 | Not Available | Positive | 4078133 - 4079773 | 61094.5 |
| dna/rna non-specific endonuclease | C1H87_RS16870 | Not Available | Positive | 4079775 - 4080584 | 30836.2 |
| t9ss type a sorting domain-containing protein | C1H87_RS16875 | Not Available | Positive | 4080694 - 4084080 | 118403.0 |
| glycosyltransferase family 2 protein | C1H87_RS16880 | Not Available | Negative | 4084131 - 4084997 | 33433.2 |
| polysaccharide deacetylase family protein | C1H87_RS16885 | Not Available | Positive | 4085378 - 4086373 | 38841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
