Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system outer membrane channel protein porv | C1H87_RS16740 | Not Available | Positive | 4042897 - 4044114 | 44953.6 |
| cytidine deaminase | C1H87_RS16745 | Not Available | Positive | 4044226 - 4044708 | 17603.2 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | C1H87_RS16750 | Not Available | Positive | 4044908 - 4045906 | 37662.1 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | C1H87_RS16755 | Not Available | Positive | 4045910 - 4047535 | 57577.5 |
| bspa family leucine-rich repeat surface protein | C1H87_RS16760 | Not Available | Positive | 4047815 - 4050619 | 104409.0 |
| m28 family metallopeptidase | C1H87_RS16765 | Not Available | Positive | 4051108 - 4052094 | 36783.7 |
| sdr family nad(p)-dependent oxidoreductase | C1H87_RS16770 | Not Available | Positive | 4052087 - 4052770 | 24962.0 |
| gliding motility-associated c-terminal domain-containing protein | C1H87_RS16775 | Not Available | Positive | 4053005 - 4055803 | 102312.0 |
| type ix secretion system membrane protein porp/sprf | C1H87_RS16780 | Not Available | Positive | 4055811 - 4056722 | 33669.1 |
| ompa family protein | C1H87_RS16785 | Not Available | Positive | 4056724 - 4058751 | 78455.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
