Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system ywqk family antitoxin | C1H87_RS16490 | Not Available | Negative | 3983468 - 3984040 | 22782.1 |
| 4fe-4s binding protein | C1H87_RS16495 | Not Available | Negative | 3984094 - 3985683 | 59127.7 |
| nad(p)/fad-dependent oxidoreductase | C1H87_RS16500 | Not Available | Negative | 3985693 - 3986991 | 49669.3 |
| duf547 domain-containing protein | C1H87_RS16505 | Not Available | Positive | 3987281 - 3987994 | 27034.6 |
| hypothetical protein | C1H87_RS16510 | Not Available | Positive | 3988025 - 3988939 | 33924.6 |
| glycoside hydrolase family 113 | C1H87_RS16515 | Not Available | Positive | 3988982 - 3989992 | 39230.9 |
| hypothetical protein | C1H87_RS16520 | Not Available | Positive | 3989985 - 3990710 | 27145.7 |
| potra domain-containing protein | C1H87_RS16525 | Not Available | Positive | 3990707 - 3991981 | 48648.5 |
| outer membrane protein assembly factor | C1H87_RS16530 | Not Available | Positive | 3992107 - 3993363 | 48727.9 |
| bspa family leucine-rich repeat surface protein | C1H87_RS16535 | Not Available | Positive | 3993711 - 3995177 | 53297.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
