Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1H87_RS23255 | Not Available | Negative | 375442 - 375618 | 6834.07 |
| ribonuclease z | C1H87_RS01565 | Not Available | Negative | 375620 - 375952 | 12579.2 |
| aspartate carbamoyltransferase catalytic subunit | C1H87_RS01570 | Not Available | Negative | 375956 - 376885 | 34307.9 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | C1H87_RS01575 | Not Available | Negative | 376952 - 377491 | 20903.2 |
| 30s ribosomal protein s1 | C1H87_RS01580 | Not Available | Negative | 377642 - 379474 | 67815.7 |
| lysm peptidoglycan-binding domain-containing protein | C1H87_RS01585 | Not Available | Positive | 379914 - 380294 | 14126.9 |
| carboxypeptidase-like regulatory domain-containing protein | C1H87_RS01590 | Not Available | Positive | 380545 - 381708 | 44648.6 |
| duf547 domain-containing protein | C1H87_RS01595 | Not Available | Negative | 381826 - 382527 | 26929.2 |
| (d)cmp kinase | C1H87_RS01600 | Not Available | Negative | 382684 - 383379 | 26101.3 |
| type ix secretion system protein porq | C1H87_RS01605 | Not Available | Negative | 383808 - 384830 | 37635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
