Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-6-phosphate aldolase | C1H87_RS16290 | Not Available | Positive | 3937795 - 3938451 | 23426.3 |
| hypothetical protein | C1H87_RS16295 | Not Available | Negative | 3938544 - 3938966 | 15095.9 |
| gaf domain-containing protein | C1H87_RS16300 | Not Available | Positive | 3939277 - 3941649 | 92164.9 |
| hypothetical protein | C1H87_RS16305 | Not Available | Positive | 3942157 - 3942477 | 11463.3 |
| hypothetical protein | C1H87_RS16310 | Not Available | Positive | 3942490 - 3942762 | 10404.0 |
| pentapeptide repeat-containing protein | C1H87_RS16315 | Not Available | Negative | 3942817 - 3943377 | 21300.9 |
| pycsar system effector family protein | C1H87_RS16320 | Not Available | Negative | 3943394 - 3944605 | 46441.5 |
| peptide-methionine (r)-s-oxide reductase msrb | C1H87_RS16325 | Not Available | Positive | 3944879 - 3945325 | 16756.7 |
| peptide-methionine (s)-s-oxide reductase msra | C1H87_RS16330 | Not Available | Positive | 3945542 - 3946081 | 20343.1 |
| peptide-methionine (s)-s-oxide reductase | C1H87_RS16335 | Not Available | Positive | 3946135 - 3946662 | 20272.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
