Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | C1H87_RS16190 | Not Available | Negative | 3909793 - 3911181 | 51179.0 |
| Trna-leu | Not Available | Not Available | Positive | 3911478 - 3911559 | Not Available |
| t9ss type a sorting domain-containing protein | C1H87_RS16200 | Not Available | Negative | 3911849 - 3913981 | 77880.2 |
| hypothetical protein | C1H87_RS16205 | Not Available | Positive | 3914959 - 3915363 | 15955.0 |
| cusa/czca family heavy metal efflux rnd transporter | C1H87_RS16210 | Not Available | Positive | 3915463 - 3919794 | 160900.0 |
| efflux rnd transporter periplasmic adaptor subunit | C1H87_RS16215 | Not Available | Positive | 3919807 - 3920976 | 43124.3 |
| thioredoxin family protein | C1H87_RS16220 | Not Available | Positive | 3921183 - 3921416 | 8117.72 |
| duf2024 family protein | C1H87_RS16225 | Not Available | Positive | 3921504 - 3921764 | 10202.0 |
| hypothetical protein | C1H87_RS16230 | Not Available | Positive | 3921827 - 3922456 | 24130.0 |
| marr family winged helix-turn-helix transcriptional regulator | C1H87_RS16235 | Not Available | Positive | 3922482 - 3923054 | 22028.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
