Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C1H87_RS16000 | Not Available | Positive | 3871540 - 3872589 | 40178.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | C1H87_RS16005 | Not Available | Positive | 3872777 - 3873817 | 39436.4 |
| t9ss type a sorting domain-containing protein | C1H87_RS16010 | Not Available | Negative | 3873867 - 3875048 | 42921.8 |
| polyprenyl synthetase family protein | C1H87_RS16015 | Not Available | Positive | 3875231 - 3876208 | 37252.6 |
| helix-turn-helix domain-containing protein | C1H87_RS16020 | Not Available | Negative | 3876217 - 3877128 | 35046.5 |
| sdr family nad(p)-dependent oxidoreductase | C1H87_RS16025 | Not Available | Negative | 3877195 - 3877956 | 27556.9 |
| rna polymerase sigma factor | C1H87_RS16030 | Not Available | Positive | 3878192 - 3878770 | 22521.4 |
| hypothetical protein | C1H87_RS16035 | Not Available | Positive | 3878757 - 3879518 | 28833.5 |
| hypothetical protein | C1H87_RS16040 | Not Available | Positive | 3879628 - 3880707 | 41421.6 |
| orf6n domain-containing protein | C1H87_RS16045 | Not Available | Positive | 3880923 - 3881453 | 20781.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
