Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase | C1H87_RS00065 | Not Available | Negative | 15172 - 16293 | 43607.1 |
| transporter | C1H87_RS00070 | Not Available | Negative | 16319 - 17341 | 38601.5 |
| duf4834 family protein | C1H87_RS00075 | Not Available | Positive | 17501 - 17782 | 10859.3 |
| yfho family protein | C1H87_RS00080 | Not Available | Positive | 17818 - 20256 | 91882.4 |
| glycosyltransferase family 4 protein | C1H87_RS00085 | Not Available | Positive | 20341 - 21624 | 49139.5 |
| lipopolysaccharide biosynthesis protein | C1H87_RS00090 | Not Available | Positive | 21701 - 23158 | 55421.4 |
| ompa family protein | C1H87_RS00095 | Not Available | Negative | 23648 - 25567 | 72591.7 |
| ompa family protein | C1H87_RS00100 | Not Available | Negative | 25654 - 27573 | 73037.3 |
| type ix secretion system membrane protein porp/sprf | C1H87_RS00105 | Not Available | Negative | 27585 - 28511 | 34459.0 |
| gliding motility-associated c-terminal domain-containing protein | C1H87_RS00110 | Not Available | Negative | 28522 - 36381 | 273747.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
