Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | C1H87_RS01215 | Not Available | Negative | 290192 - 290644 | 17101.4 |
| dead/deah box helicase | C1H87_RS01220 | Not Available | Negative | 290775 - 292328 | 59396.2 |
| sulfatase-like hydrolase/transferase | C1H87_RS01225 | Not Available | Positive | 292525 - 293832 | 48204.5 |
| alpha/beta hydrolase family protein | C1H87_RS01230 | Not Available | Positive | 294094 - 296400 | 87249.1 |
| l-glyceraldehyde 3-phosphate reductase | C1H87_RS01235 | Not Available | Positive | 296593 - 297606 | 37768.0 |
| t9ss type a sorting domain-containing protein | C1H87_RS01240 | Not Available | Negative | 297620 - 298348 | 27322.5 |
| hypothetical protein | C1H87_RS01245 | Not Available | Negative | 298396 - 299070 | 25413.5 |
| hypothetical protein | C1H87_RS23635 | Not Available | Positive | 299853 - 299987 | 5367.4 |
| rna polymerase sigma factor | C1H87_RS01255 | Not Available | Positive | 300434 - 301015 | 22722.8 |
| fecr family protein | C1H87_RS01260 | Not Available | Positive | 301310 - 302350 | 40618.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
