Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | C1H87_RS01120 | Not Available | Positive | 271201 - 272271 | 42271.8 |
| lytr/algr family response regulator transcription factor | C1H87_RS01125 | Not Available | Positive | 272271 - 272969 | 26977.8 |
| hypothetical protein | C1H87_RS01130 | Not Available | Negative | 273493 - 274122 | 24312.3 |
| t9ss type a sorting domain-containing protein | C1H87_RS01135 | Not Available | Negative | 274488 - 276332 | 67482.4 |
| peptidoglycan dd-metalloendopeptidase family protein | C1H87_RS01140 | Not Available | Positive | 276856 - 277767 | 34462.3 |
| hypothetical protein | C1H87_RS01145 | Not Available | Negative | 277778 - 278518 | 27912.8 |
| family 16 glycoside hydrolase | C1H87_RS01150 | Not Available | Negative | 278521 - 279147 | 24380.0 |
| hypothetical protein | C1H87_RS01155 | Not Available | Positive | 279282 - 280562 | 49515.9 |
| glycosyltransferase family 9 protein | C1H87_RS01160 | Not Available | Negative | 280583 - 281629 | 40006.3 |
| alkene reductase | C1H87_RS01165 | Not Available | Negative | 281820 - 282884 | 38885.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
