Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C1H87_RS00715 | Not Available | Negative | 167854 - 168543 | 24952.2 |
| hypothetical protein | C1H87_RS00720 | Not Available | Positive | 168676 - 168966 | 10795.1 |
| glyoxalase | C1H87_RS00725 | Not Available | Negative | 169300 - 169716 | 16085.8 |
| sdr family nad(p)-dependent oxidoreductase | C1H87_RS00730 | Not Available | Negative | 169845 - 170594 | 26338.5 |
| tetr/acrr family transcriptional regulator | C1H87_RS00735 | Not Available | Negative | 170648 - 171229 | 21874.1 |
| duf72 domain-containing protein | C1H87_RS00740 | Not Available | Positive | 171358 - 172245 | 34833.1 |
| acyl-coa thioesterase | C1H87_RS00745 | Not Available | Positive | 172260 - 172649 | 14660.9 |
| 3-isopropylmalate dehydratase large subunit | C1H87_RS00750 | Not Available | Positive | 172947 - 174341 | 50150.7 |
| 3-isopropylmalate dehydratase small subunit | C1H87_RS00755 | Not Available | Positive | 174391 - 174987 | 22434.3 |
| alpha-isopropylmalate synthase regulatory domain-containing protein | C1H87_RS00760 | Not Available | Positive | 174988 - 176508 | 56599.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
