Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | C1H87_RS00665 | Not Available | Positive | 156937 - 157692 | 27111.3 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | C1H87_RS00670 | Not Available | Positive | 157720 - 158313 | 22234.4 |
| hypothetical protein | C1H87_RS00675 | Not Available | Positive | 158359 - 158706 | 13121.2 |
| type iv pili methyl-accepting chemotaxis transducer n-terminal domain-containing protein | C1H87_RS00680 | Not Available | Positive | 159378 - 160211 | 31943.6 |
| hypothetical protein | C1H87_RS00685 | Not Available | Negative | 160452 - 160871 | 15617.3 |
| trna pseudouridine synthase a | C1H87_RS00690 | Not Available | Positive | 160973 - 161749 | 30007.5 |
| duf2461 domain-containing protein | C1H87_RS00695 | Not Available | Positive | 161836 - 162516 | 26669.7 |
| duf3526 domain-containing protein | C1H87_RS00700 | Not Available | Negative | 162579 - 163919 | 51867.9 |
| abc transporter permease | C1H87_RS00705 | Not Available | Negative | 163921 - 165360 | 54727.9 |
| tonb-dependent receptor | C1H87_RS00710 | Not Available | Negative | 165363 - 167849 | 92623.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
