Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | C1H87_RS06330 | Not Available | Positive | 1516987 - 1517751 | 27795.8 |
| parb/repb/spo0j family partition protein | C1H87_RS06335 | Not Available | Positive | 1517758 - 1518669 | 34464.5 |
| duf5683 domain-containing protein | C1H87_RS06340 | Not Available | Positive | 1518659 - 1519276 | 23407.1 |
| 4-hydroxy-tetrahydrodipicolinate reductase | C1H87_RS06345 | Not Available | Positive | 1519277 - 1519981 | 25596.5 |
| signal peptidase i | C1H87_RS06350 | Not Available | Positive | 1520048 - 1521634 | 61131.6 |
| wbqc family protein | C1H87_RS06355 | Not Available | Positive | 1521729 - 1522352 | 24463.0 |
| duf6122 family protein | C1H87_RS06360 | Not Available | Positive | 1522352 - 1522660 | 11856.0 |
| endonuclease/exonuclease/phosphatase family protein | C1H87_RS06365 | Not Available | Negative | 1523145 - 1523864 | 27959.0 |
| rhomboid family protein | C1H87_RS06370 | Not Available | Negative | 1524478 - 1525350 | 32542.3 |
| rhomboid family intramembrane serine protease | C1H87_RS06375 | Not Available | Negative | 1525350 - 1526099 | 28275.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
