Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | C1H87_RS06130 | Not Available | Negative | 1482298 - 1483506 | 45285.6 |
| Tmrna,resume consensus sequence (at 88): tttaaacggcgaaaataa | Not Available | Not Available | Positive | 1483795 - 1484187 | Not Available |
| jab domain-containing protein | C1H87_RS06140 | Not Available | Negative | 1484308 - 1484754 | 16635.3 |
| helix-turn-helix domain-containing protein | C1H87_RS06145 | Not Available | Positive | 1484932 - 1485219 | 10847.1 |
| fic family protein | C1H87_RS06150 | Not Available | Positive | 1485298 - 1486362 | 40786.5 |
| fmn-binding negative transcriptional regulator | C1H87_RS06155 | Not Available | Negative | 1486470 - 1487105 | 24528.1 |
| cpbp family intramembrane glutamic endopeptidase | C1H87_RS06160 | Not Available | Positive | 1487416 - 1488126 | 27073.2 |
| ykgj family cysteine cluster protein | C1H87_RS06165 | Not Available | Positive | 1488384 - 1488986 | 22635.5 |
| crp/fnr family transcriptional regulator | C1H87_RS06170 | Not Available | Positive | 1489063 - 1489641 | 22292.0 |
| type ii toxin-antitoxin system rata family toxin | C1H87_RS06175 | Not Available | Positive | 1489703 - 1490533 | 31690.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
